Phylogenetic
Methods

Phylogenetics
Main Page

Input-output
Data

Data Conversion

Algorithms

Software Use

An Alternative
Approach

Bibliography

Felsenstein, J. (2002). PHYLIP: Phylogenetic Inference Package, Version 3.6. Seattle, Wash., University of Washington.

Futuyma, D. J. (1998). Evolutionary Biology. Sunderland, Mass., Sinauer. Ch. 5.

Graur, D. and W.-H. Li (2000). Fundamentals of Molecular Evolution. Sunderland, Mass., Sinauer.

Hall, B. G. (2001). Phylognetic Trees Made Easy: A How-To Manual for Molecular Biologists. Sunderland, Mass., Sinauer.

Hillis, D. M., C. Moritz and B. K. Mable, Eds. (1996). Molecular Systematics. Sunderland, Mass., Sinauer.

Li, W.-H. (1997). Molecular Evolution. Sunderland, Mass., Sinauer.

Maddison, D. R. and W. P. Maddison (2001). MacClade 4: Analysis of Phylogeny and Character Evolution. Sunderland, Mass., Sinauer.

Nei, M. and S. Kumar (2000). Molecular Evolution and Phylogenetics. Oxford, Oxford University Press.

Page, R. D. M. and E. Holmes (1998). Molecular Evolution: A Phylogenetic Approach. Cambridge, Mass., Blackwell.

Ridley, M. (1996). Evolution. Cambridge, Mass., Blackwell. Ch. 17.

Swofford, D. L. (2002). PAUP* Version 4: Phylogenetic Analysis Using Parsimony. Sunderland, Mass., Sinauer.

Swofford, D. L., G. J. Olson, P. J. Waddell and D. M. Hillis (1996). Phylogenetic Inference. In Hillis et al. (1996), 407--514.